Results
  model coordinates only   fit to EM map   vs reference structure   vs other models   ligands   Comparative Analyses
         help
  Global Accuracy   Local Accuracy
 
  Scores   Plots
 
Target: 
Filter by method: ab-initio  optimized cryoEM model  optimized other known model  not optimized  ab-initio+optimized (mixed)
    
Filter by effort:    fully automated    partially automated, with some manual steps    manual              
download csv
#     Model     Group
    Name
Method EM Map TemPy Phenix     EMRinger
    score
    Q-score Atom Inclusion
    ab-initio/
    optimized
    auto/
    man.
    MapID     Res
    ol.
    CCC     SMOC     box CC     CC(mask)     CC(vol)     CC(peaks)     Resol.(FSC=0.5)     Protein     Ligand (PTQ)     LIVQ5     LIVQ10     MG     NA     HOH     All     BB
1 T0201EM002_2 si not_optim auto emd_7770 1.9 0.79 0.67 0.87 0.94 0.94 0.87 2.09 7.31 0.81 0.72 0.81 0.83 - - 0.81 0.92 0.98
2 T0201EM6cvm - - - emd_7770 1.9 0.79 0.67 0.81 0.91 0.91 0.81 2.10 7.66 0.82 0.71 0.81 0.83 0.91 0.88 0.86 0.92 0.99
3 T0201EM005_1 chiu not_optim auto+man emd_7770 1.9 0.79 0.67 0.77 0.79 0.80 0.74 2.85 7.66 0.82 0.73 0.82 0.83 0.89 0.86 0.90 0.91 0.99
4 T0201EM005_2 chiu not_optim auto+man emd_7770 1.9 0.79 0.67 0.77 0.79 0.80 0.74 2.85 7.66 0.82 0.81 0.83 0.84 0.89 0.86 0.90 0.91 0.99
5 T0201EM010_1 chojnowski abinit+opt auto+man emd_7770 1.9 0.78 0.67 0.84 0.92 0.92 0.83 2.10 7.00 0.81 0.69 0.80 0.81 0.90 - 0.93 0.92 0.98
6 T0201EM006_1 mattbaker abinit+opt auto+man emd_7770 1.9 0.78 0.67 0.84 0.91 0.91 0.84 2.10 6.43 0.81 0.79 0.83 0.82 0.89 0.88 0.85 0.91 0.98
7 T0201EM009_1 phenix optim auto+man emd_7770 1.9 0.78 0.67 0.87 0.93 0.93 0.87 2.09 6.45 0.81 0.78 0.82 0.83 0.89 0.89 0.92 0.91 0.98
8 T0201EM011_1 igaev abinit+opt auto+man emd_7770 1.9 0.77 0.63 0.75 0.72 0.78 0.71 2.15 7.11 0.79 0.64 0.76 0.79 0.87 0.86 - 0.54 0.98
9 T0201EM015_1 schroeder optim auto+man emd_7770 1.9 0.77 0.63 0.73 0.70 0.77 0.70 2.17 6.98 0.78 0.77 0.82 0.79 0.70 0.90 0.80 0.53 0.97
10 T0201EM002_1 si abinit+opt auto emd_7770 1.9 0.73 0.62 0.82 0.86 0.85 0.80 2.20 3.32 0.71 0.55 0.68 0.69 - - 0.64 0.84 0.94
11 T0201EM007_1 perez optim auto+man emd_7770 1.9 0.72 0.58 - - - - - - 0.73 0.31 0.52 0.73 0.66 0.57 0.53 0.55 0.93
12 T0201EM004_1 cheng abinit+opt auto+man emd_7770 1.9 0.69 0.58 0.62 0.59 0.68 0.57 2.76 3.46 0.65 0.71 0.57 0.66 0.89 0.87 - - -
13 T0201EM002_3 si abinit+opt auto emd_7770 1.9 0.65 0.55 0.74 0.74 0.74 0.69 2.69 1.99 0.58 0.60 0.29 0.47 - - 0.34 0.72 0.92
14 T0201EM004_2 cheng abinit+opt auto+man emd_7770 1.9 0.45 0.34 0.36 0.27 0.39 0.25 8.20 0.64 0.26 0.45 0.52 0.53 0.54 0.57 - 0.37 0.57
15 T0201EM003_2 dimaio optim auto+man emd_7770 1.9 0.39 0.67 0.58 0.87 0.85 0.47 2.09 7.60 0.82 0.71 0.82 0.83 0.87 0.88 0.88 0.55 0.99
16 T0201EM003_1 dimaio optim auto+man emd_7770 1.9 0.39 0.67 0.52 0.87 0.85 0.37 2.10 7.62 0.82 0.71 0.82 0.83 0.87 0.87 0.89 0.55 0.99
17 T0201EM003_3 dimaio optim auto+man emd_7770 1.9 0.39 0.67 0.57 0.86 0.84 0.46 2.10 7.63 0.82 0.03 0.66 0.80 0.85 0.66 0.88 0.54 0.99
18 T0201EM012_1 palmer optim auto+man emd_7770 1.9 0.39 0.68 0.57 0.95 0.94 0.40 2.08 7.45 0.82 0.81 0.84 0.84 0.90 0.91 0.85 0.92 0.98
19 T0201EM001_2 kihara optim auto+man emd_7770 1.9 0.39 0.65 0.46 0.67 0.67 0.33 2.28 7.57 0.81 0.65 0.80 0.82 0.64 0.49 0.32 - -
20 T0201EM014_1 kao optim manual emd_7770 1.9 0.39 0.65 0.50 0.89 0.89 0.29 2.10 7.22 0.81 0.82 0.83 0.83 0.91 0.89 0.86 0.64 0.98
21 T0201EM001_3 kihara optim auto+man emd_7770 1.9 0.39 0.65 0.46 0.67 0.68 0.34 2.27 7.51 0.81 0.62 0.79 0.82 0.73 0.90 0.34 - -
22 T0201EM013_1 singharoy optim auto+man emd_7770 1.9 0.39 0.65 0.49 0.71 0.72 0.38 2.17 7.44 0.81 0.63 0.79 0.82 0.56 0.91 0.48 - -
23 T0201EM008_1 emsley optim auto+man emd_7770 1.9 0.38 0.64 - - - - - 6.89 - - - - - - - 0.54 0.98
24 T0201EM001_1 kihara abinit+opt auto+man emd_7770 1.9 0.37 0.61 0.43 0.62 0.64 0.30 2.58 5.18 0.74 0.33 0.58 0.63 - - 0.17 - -
EMDataResource
Sponsored by the US National Institute of General Medical Sciences (NIH/NIGMS)
Please address any questions or queries to:
© 2015-2021